Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtp1Q8C8C1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Gm9172-201ENSMUST00000212092 954 ntBASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtp1Q8C8C1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rtp1Q8C8C1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rtp1Q8C8C1 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Gm17271-201ENSMUST00000165535 355 ntBASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtp1Q8C8C1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.5■□□□□ 0.55
Rtp1Q8C8C1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.49■□□□□ 0.55
Rtp1Q8C8C1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Gm13616-201ENSMUST00000120600 222 ntBASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 AA543401-201ENSMUST00000164248 1269 ntBASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtp1Q8C8C1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms