Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx6Q8C7R7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rfx6Q8C7R7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Gm715-201ENSMUST00000117865 831 ntBASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.58■□□□□ 0.24
Rfx6Q8C7R7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.57■□□□□ 0.24
Rfx6Q8C7R7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Gm13186-201ENSMUST00000118031 316 ntBASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Phf7-203ENSMUST00000226565 1971 ntBASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx6Q8C7R7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx6Q8C7R7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Gm27463-201ENSMUST00000183569 57 ntBASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Rfx6Q8C7R7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms