Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim9Q8C7M3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Gm13836-201ENSMUST00000121159 501 ntBASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim9Q8C7M3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Gm6623-201ENSMUST00000173570 544 ntBASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Gm44430-201ENSMUST00000203376 995 ntBASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Trim9Q8C7M3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Gm10052-201ENSMUST00000168019 960 ntBASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Gm7729-201ENSMUST00000050143 801 ntBASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Dancr-204ENSMUST00000132389 2347 ntBASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim9Q8C7M3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim9Q8C7M3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim9Q8C7M3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms