Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc60Q8C4J0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc60Q8C4J0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Gm14859-201ENSMUST00000117752 357 ntBASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Gm7367-201ENSMUST00000057611 492 ntBASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc60Q8C4J0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc60Q8C4J0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc60Q8C4J0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Ccdc60Q8C4J0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc60Q8C4J0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc60Q8C4J0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc60Q8C4J0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc60Q8C4J0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc60Q8C4J0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Ccdc60Q8C4J0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms