Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rft1Q8C3B8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Gm38027-201ENSMUST00000192315 235 ntBASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rft1Q8C3B8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Gm24841-201ENSMUST00000158676 357 ntBASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rft1Q8C3B8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rft1Q8C3B8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rft1Q8C3B8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms