Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cps1Q8C196 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cps1Q8C196 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Cps1Q8C196 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC21.82■■□□□ 1.08
Cps1Q8C196 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cps1Q8C196 Gm17271-201ENSMUST00000165535 355 ntBASIC21.82■■□□□ 1.08
Cps1Q8C196 Gm7787-201ENSMUST00000216858 688 ntBASIC21.82■■□□□ 1.08
Cps1Q8C196 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cps1Q8C196 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cps1Q8C196 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cps1Q8C196 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cps1Q8C196 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC21.81■■□□□ 1.08
Cps1Q8C196 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC21.81■■□□□ 1.08
Cps1Q8C196 AC155252.2-201ENSMUST00000226946 680 ntBASIC21.81■■□□□ 1.08
Cps1Q8C196 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cps1Q8C196 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Cps1Q8C196 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cps1Q8C196 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC21.8■■□□□ 1.08
Cps1Q8C196 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Cps1Q8C196 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Gm13294-201ENSMUST00000121757 1330 ntBASIC21.8■■□□□ 1.08
Cps1Q8C196 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cps1Q8C196 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cps1Q8C196 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cps1Q8C196 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
Cps1Q8C196 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC21.8■■□□□ 1.08
Cps1Q8C196 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cps1Q8C196 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cps1Q8C196 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.79■■□□□ 1.08
Cps1Q8C196 Gm12892-201ENSMUST00000117367 1146 ntBASIC21.79■■□□□ 1.08
Cps1Q8C196 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Gm44872-201ENSMUST00000207864 420 ntBASIC21.79■■□□□ 1.08
Cps1Q8C196 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC21.79■■□□□ 1.08
Cps1Q8C196 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.79■■□□□ 1.08
Cps1Q8C196 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cps1Q8C196 Gm13332-201ENSMUST00000120451 1398 ntBASIC21.78■■□□□ 1.08
Cps1Q8C196 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Gm11745-201ENSMUST00000121669 448 ntBASIC21.78■■□□□ 1.08
Cps1Q8C196 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Cps1Q8C196 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Cps1Q8C196 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cps1Q8C196 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cps1Q8C196 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cps1Q8C196 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cps1Q8C196 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Cps1Q8C196 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC21.77■■□□□ 1.08
Cps1Q8C196 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Cps1Q8C196 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cps1Q8C196 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cps1Q8C196 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cps1Q8C196 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cps1Q8C196 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.76■■□□□ 1.07
Cps1Q8C196 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Cps1Q8C196 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Cps1Q8C196 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cps1Q8C196 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Cps1Q8C196 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Cps1Q8C196 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cps1Q8C196 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms