Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.25■□□□□ 0.03
Cpne1Q8C166 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne1Q8C166 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.25■□□□□ 0.03
Cpne1Q8C166 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpne1Q8C166 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Cpne1Q8C166 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cpne1Q8C166 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Gm29518-201ENSMUST00000190858 372 ntBASIC15.22■□□□□ 0.03
Cpne1Q8C166 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne1Q8C166 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne1Q8C166 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne1Q8C166 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne1Q8C166 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cpne1Q8C166 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne1Q8C166 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cpne1Q8C166 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms