Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Gm10013-201ENSMUST00000106074 672 ntBASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf3Q8C120 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Gm11355-201ENSMUST00000121120 306 ntBASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Gm13836-201ENSMUST00000121159 501 ntBASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3rf3Q8C120 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.97■□□□□ 0.31
Sh3rf3Q8C120 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sh3rf3Q8C120 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3rf3Q8C120 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.96■□□□□ 0.3
Sh3rf3Q8C120 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.96■□□□□ 0.3
Sh3rf3Q8C120 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf3Q8C120 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms