Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf2Q8BZT2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Gm43514-201ENSMUST00000198852 424 ntBASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf2Q8BZT2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf2Q8BZT2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
Sh3rf2Q8BZT2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Gm2651-201ENSMUST00000203560 838 ntBASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf2Q8BZT2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf2Q8BZT2 AW822252-206ENSMUST00000208904 237 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms