Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ubr7Q8BU04 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ubr7Q8BU04 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm13884-201ENSMUST00000118103 829 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44357-201ENSMUST00000195897 142 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm19658-201ENSMUST00000196231 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44367-201ENSMUST00000196836 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44350-201ENSMUST00000197197 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44390-201ENSMUST00000197533 144 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44313-201ENSMUST00000198018 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44486-201ENSMUST00000198508 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44314-201ENSMUST00000199263 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44394-201ENSMUST00000199558 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44484-201ENSMUST00000199873 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44466-201ENSMUST00000200264 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm44359-201ENSMUST00000200671 138 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm5864-201ENSMUST00000202263 970 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ubr7Q8BU04 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Mir8098-201ENSMUST00000184011 137 ntBASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ubr7Q8BU04 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Gm7506-201ENSMUST00000207758 815 ntBASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Ubr7Q8BU04 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms