Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf7Q8BTV2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.33■□□□□ 0.21
Cpsf7Q8BTV2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf7Q8BTV2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cpsf7Q8BTV2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf7Q8BTV2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf7Q8BTV2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Gm18958-201ENSMUST00000174258 762 ntBASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf7Q8BTV2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf7Q8BTV2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf7Q8BTV2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms