Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Gm30025-201ENSMUST00000218555 728 ntBASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cpne3Q8BT60 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Cpne3Q8BT60 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cpne3Q8BT60 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Phf7-203ENSMUST00000226565 1971 ntBASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Gm37055-201ENSMUST00000191866 133 ntBASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Actl10-202ENSMUST00000226583 1501 ntBASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cpne3Q8BT60 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms