Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ppp1r3eQ8BRJ4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Phf7-203ENSMUST00000226565 1971 ntBASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.27■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ppp1r3eQ8BRJ4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ppp1r3eQ8BRJ4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.24■□□□□ 0.03
Ppp1r3eQ8BRJ4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms