Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp1Q8BJQ2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Gm6296-201ENSMUST00000222599 943 ntBASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp1Q8BJQ2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp1Q8BJQ2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Gm18206-201ENSMUST00000207027 926 ntBASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp1Q8BJQ2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp1Q8BJQ2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44357-201ENSMUST00000195897 142 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm19658-201ENSMUST00000196231 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44367-201ENSMUST00000196836 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44350-201ENSMUST00000197197 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44390-201ENSMUST00000197533 144 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44313-201ENSMUST00000198018 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44486-201ENSMUST00000198508 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44314-201ENSMUST00000199263 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44394-201ENSMUST00000199558 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44484-201ENSMUST00000199873 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44466-201ENSMUST00000200264 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm44359-201ENSMUST00000200671 138 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Usp1Q8BJQ2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp1Q8BJQ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp1Q8BJQ2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms