Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.75■□□□□ 0.11
Rnf38Q8BI21 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rnf38Q8BI21 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 App-207ENSMUST00000227737 2827 ntBASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rnf38Q8BI21 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Gm37055-201ENSMUST00000191866 133 ntBASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf38Q8BI21 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Gm7370-201ENSMUST00000219471 767 ntBASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf38Q8BI21 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms