Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Scn3bQ8BHK2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn3bQ8BHK2 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Gm27000-201ENSMUST00000182943 842 ntBASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Gm10517-202ENSMUST00000192970 758 ntBASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn3bQ8BHK2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Gm18025-201ENSMUST00000221733 862 ntBASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn3bQ8BHK2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Gm12382-201ENSMUST00000122005 922 ntBASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Mir5133-201ENSMUST00000174955 77 ntBASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn3bQ8BHK2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Asic1-205ENSMUST00000228185 1818 ntBASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Gm42545-201ENSMUST00000202755 922 ntBASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scn3bQ8BHK2 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms