Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim23Q8BGX0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Gm15372-201ENSMUST00000120729 834 ntBASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.69■□□□□ 0.1
Trim23Q8BGX0 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim23Q8BGX0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Rprl3-201ENSMUST00000157400 290 ntBASIC15.68■□□□□ 0.1
Trim23Q8BGX0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.68■□□□□ 0.1
Trim23Q8BGX0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim23Q8BGX0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim23Q8BGX0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Trim23Q8BGX0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim23Q8BGX0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim23Q8BGX0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim23Q8BGX0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim23Q8BGX0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms