Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1l4Q8BGJ9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
U2af1l4Q8BGJ9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
U2af1l4Q8BGJ9 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Gm27525-201ENSMUST00000184465 107 ntBASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
U2af1l4Q8BGJ9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
U2af1l4Q8BGJ9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Gm11452-201ENSMUST00000122376 690 ntBASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Gm44450-201ENSMUST00000199528 114 ntBASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Gm18206-201ENSMUST00000207027 926 ntBASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
U2af1l4Q8BGJ9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
U2af1l4Q8BGJ9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.66
U2af1l4Q8BGJ9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
U2af1l4Q8BGJ9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.13■□□□□ 0.65
U2af1l4Q8BGJ9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
U2af1l4Q8BGJ9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
U2af1l4Q8BGJ9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
U2af1l4Q8BGJ9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms