Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim6Q8BGE7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim6Q8BGE7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim6Q8BGE7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.32■□□□□ 0.36
Trim6Q8BGE7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Il3ra-202ENSMUST00000223589 738 ntBASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim6Q8BGE7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Gm38027-201ENSMUST00000192315 235 ntBASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim6Q8BGE7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim6Q8BGE7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim6Q8BGE7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms