Protein–RNA interactions for Protein: Q8BFX1

Rnf187, E3 ubiquitin-protein ligase RNF187, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf187Q8BFX1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Il3ra-202ENSMUST00000223589 738 ntBASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf187Q8BFX1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf187Q8BFX1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf187Q8BFX1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf187Q8BFX1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Gm27463-201ENSMUST00000183569 57 ntBASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf187Q8BFX1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf187Q8BFX1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf187Q8BFX1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Rnf187Q8BFX1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf187Q8BFX1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Rnf187Q8BFX1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf187Q8BFX1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms