Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim65Q8BFW4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim65Q8BFW4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim65Q8BFW4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim65Q8BFW4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim65Q8BFW4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim65Q8BFW4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Gm7977-201ENSMUST00000193787 748 ntBASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim65Q8BFW4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Gm5587-201ENSMUST00000206270 674 ntBASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trim65Q8BFW4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim65Q8BFW4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim65Q8BFW4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim65Q8BFW4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trim65Q8BFW4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Gm6659-201ENSMUST00000174752 547 ntBASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim65Q8BFW4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim65Q8BFW4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms