Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Usp6nlQ80XC3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Gm14140-201ENSMUST00000119999 995 ntBASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp6nlQ80XC3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Gm27702-201ENSMUST00000184512 56 ntBASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp6nlQ80XC3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Gm14494-201ENSMUST00000118786 435 ntBASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Gm12260-201ENSMUST00000122447 411 ntBASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp6nlQ80XC3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Gm9727-201ENSMUST00000161387 555 ntBASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp6nlQ80XC3 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms