Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Gm25745-201ENSMUST00000174945 133 ntBASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Gm6296-201ENSMUST00000222599 943 ntBASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rab3gap1Q80UJ7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rab3gap1Q80UJ7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rab3gap1Q80UJ7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.76■□□□□ 0.75
Rab3gap1Q80UJ7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rab3gap1Q80UJ7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Gm7506-201ENSMUST00000207758 815 ntBASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Rab3gap1Q80UJ7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Rps4l-201ENSMUST00000071745 943 ntBASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rab3gap1Q80UJ7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab3gap1Q80UJ7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab3gap1Q80UJ7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab3gap1Q80UJ7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rab3gap1Q80UJ7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms