Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Rpap1Q80TE0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Gm8344-201ENSMUST00000119813 856 ntBASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Gm17968-201ENSMUST00000194902 784 ntBASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 AC147366.1-201ENSMUST00000227671 852 ntBASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Gm43702-201ENSMUST00000198772 2546 ntBASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Rpap1Q80TE0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Rpap1Q80TE0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Gm11841-201ENSMUST00000117060 1963 ntBASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC25.1■■□□□ 1.61
Rpap1Q80TE0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rpap1Q80TE0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Rpap1Q80TE0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Gm11025-201ENSMUST00000140773 466 ntBASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Rpap1Q80TE0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Rpap1Q80TE0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Gm17271-201ENSMUST00000165535 355 ntBASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Mir6956-201ENSMUST00000183598 62 ntBASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Gm44492-201ENSMUST00000197012 141 ntBASIC25.07■■□□□ 1.6
Rpap1Q80TE0 AC154572.2-201ENSMUST00000225105 997 ntBASIC25.07■■□□□ 1.6
Rpap1Q80TE0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Rpap1Q80TE0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms