Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Gm15920-201ENSMUST00000118998 402 ntBASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Gm12644-201ENSMUST00000119935 606 ntBASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38bQ80SY5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Gm14057-201ENSMUST00000120631 482 ntBASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38bQ80SY5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38bQ80SY5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gm24513-201ENSMUST00000174964 138 ntBASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gm10060-201ENSMUST00000212002 111 ntBASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Prpf38bQ80SY5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms