Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.72□□□□□ -0.21
Smim12Q78RX3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smim12Q78RX3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Gm11539-201ENSMUST00000119837 557 ntBASIC13.71□□□□□ -0.21
Smim12Q78RX3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.71□□□□□ -0.21
Smim12Q78RX3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.71□□□□□ -0.21
Smim12Q78RX3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smim12Q78RX3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim12Q78RX3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Smim12Q78RX3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim12Q78RX3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smim12Q78RX3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim12Q78RX3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.71□□□□□ -0.22
Smim12Q78RX3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smim12Q78RX3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.7□□□□□ -0.22
Smim12Q78RX3 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.7□□□□□ -0.22
Smim12Q78RX3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.7□□□□□ -0.22
Smim12Q78RX3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.7□□□□□ -0.22
Smim12Q78RX3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.7□□□□□ -0.22
Smim12Q78RX3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim12Q78RX3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Phf7-203ENSMUST00000226565 1971 ntBASIC13.69□□□□□ -0.22
Smim12Q78RX3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim12Q78RX3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.69□□□□□ -0.22
Smim12Q78RX3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smim12Q78RX3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms