Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cspg5Q71M36 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.86■□□□□ 0.29
Cspg5Q71M36 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Gm2651-201ENSMUST00000203560 838 ntBASIC16.86■□□□□ 0.29
Cspg5Q71M36 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.86■□□□□ 0.29
Cspg5Q71M36 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.86■□□□□ 0.29
Cspg5Q71M36 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.86■□□□□ 0.29
Cspg5Q71M36 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cspg5Q71M36 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
Cspg5Q71M36 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.85■□□□□ 0.29
Cspg5Q71M36 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Gm11594-201ENSMUST00000122313 162 ntBASIC16.85■□□□□ 0.29
Cspg5Q71M36 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Cspg5Q71M36 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.85■□□□□ 0.29
Cspg5Q71M36 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.85■□□□□ 0.29
Cspg5Q71M36 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
Cspg5Q71M36 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.84■□□□□ 0.29
Cspg5Q71M36 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Mir8112-201ENSMUST00000184382 131 ntBASIC16.84■□□□□ 0.29
Cspg5Q71M36 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg5Q71M36 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Cspg5Q71M36 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cspg5Q71M36 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.83■□□□□ 0.28
Cspg5Q71M36 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cspg5Q71M36 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg5Q71M36 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms