Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.49■□□□□ 0.55
Ddx55Q6ZPL9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx55Q6ZPL9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Gm15920-201ENSMUST00000118998 402 ntBASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ddx55Q6ZPL9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Gm27300-201ENSMUST00000184085 97 ntBASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Gm27335-201ENSMUST00000184758 97 ntBASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Gm45167-201ENSMUST00000208007 322 ntBASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx55Q6ZPL9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Ddx55Q6ZPL9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Gm4899-201ENSMUST00000178708 719 ntBASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx55Q6ZPL9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Gm37153-201ENSMUST00000193637 231 ntBASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx55Q6ZPL9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms