Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slc44a1Q6X893 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Gm15372-201ENSMUST00000120729 834 ntBASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Slc44a1Q6X893 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Mir6404-201ENSMUST00000183699 94 ntBASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Gm10819-201ENSMUST00000099988 561 ntBASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a1Q6X893 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Gm9103-201ENSMUST00000119371 405 ntBASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Gm28033-201ENSMUST00000184224 96 ntBASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Gm44454-201ENSMUST00000198541 138 ntBASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a1Q6X893 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a1Q6X893 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a1Q6X893 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a1Q6X893 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a1Q6X893 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a1Q6X893 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a1Q6X893 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Slc44a1Q6X893 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.83■□□□□ 0.6
Slc44a1Q6X893 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.83■□□□□ 0.6
Slc44a1Q6X893 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms