Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Auts2-212ENSMUST00000178555 309 ntBASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Gm36967-201ENSMUST00000193814 266 ntBASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Snrnp40Q6PE01 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Snrnp40Q6PE01 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.27□□□□□ -0.12
Snrnp40Q6PE01 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snrnp40Q6PE01 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snrnp40Q6PE01 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Snrnp40Q6PE01 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Snrnp40Q6PE01 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Snrnp40Q6PE01 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Snrnp40Q6PE01 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.25□□□□□ -0.13
Snrnp40Q6PE01 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms