Protein–RNA interactions for Protein: Q6P7W5

Tsen2, tRNA-splicing endonuclease subunit Sen2, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen2Q6P7W5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tsen2Q6P7W5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tsen2Q6P7W5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tsen2Q6P7W5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Gm43347-201ENSMUST00000200226 580 ntBASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.34■■□□□ 1.01
Tsen2Q6P7W5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen2Q6P7W5 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.33■■□□□ 1
Tsen2Q6P7W5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen2Q6P7W5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen2Q6P7W5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen2Q6P7W5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen2Q6P7W5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen2Q6P7W5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.32■■□□□ 1
Tsen2Q6P7W5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Tsen2Q6P7W5 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.32■■□□□ 1
Tsen2Q6P7W5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Tsen2Q6P7W5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.31■■□□□ 1
Tsen2Q6P7W5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tsen2Q6P7W5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tsen2Q6P7W5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tsen2Q6P7W5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tsen2Q6P7W5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.3■■□□□ 1
Tsen2Q6P7W5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tsen2Q6P7W5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.3■■□□□ 1
Tsen2Q6P7W5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms