Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14□□□□□ -0.17
Vamp1Q62442 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14□□□□□ -0.17
Vamp1Q62442 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14□□□□□ -0.17
Vamp1Q62442 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Gm10652-201ENSMUST00000199790 2622 ntBASIC14□□□□□ -0.17
Vamp1Q62442 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Vamp1Q62442 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vamp1Q62442 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.99□□□□□ -0.17
Vamp1Q62442 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Gm11927-201ENSMUST00000118472 759 ntBASIC13.99□□□□□ -0.17
Vamp1Q62442 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Mir6349-201ENSMUST00000184059 97 ntBASIC13.99□□□□□ -0.17
Vamp1Q62442 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Mtag2-201ENSMUST00000058665 714 ntBASIC13.99□□□□□ -0.17
Vamp1Q62442 Gm10493-201ENSMUST00000097270 612 ntBASIC13.99□□□□□ -0.17
Vamp1Q62442 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.99□□□□□ -0.17
Vamp1Q62442 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.99□□□□□ -0.17
Vamp1Q62442 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Vamp1Q62442 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Vamp1Q62442 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.98□□□□□ -0.17
Vamp1Q62442 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Gm18671-201ENSMUST00000214826 683 ntBASIC13.98□□□□□ -0.17
Vamp1Q62442 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Vamp1Q62442 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vamp1Q62442 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vamp1Q62442 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Vamp1Q62442 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vamp1Q62442 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vamp1Q62442 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vamp1Q62442 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.97□□□□□ -0.17
Vamp1Q62442 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.97□□□□□ -0.17
Vamp1Q62442 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vamp1Q62442 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms