Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.72■□□□□ 0.27
Six1Q62231 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.72■□□□□ 0.27
Six1Q62231 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.72■□□□□ 0.27
Six1Q62231 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Six1Q62231 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Six1Q62231 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Six1Q62231 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.71■□□□□ 0.27
Six1Q62231 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.71■□□□□ 0.27
Six1Q62231 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.71■□□□□ 0.27
Six1Q62231 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Six1Q62231 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Six1Q62231 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Six1Q62231 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.7■□□□□ 0.26
Six1Q62231 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six1Q62231 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Six1Q62231 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Gm26039-201ENSMUST00000158152 144 ntBASIC16.7■□□□□ 0.26
Six1Q62231 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six1Q62231 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.7■□□□□ 0.26
Six1Q62231 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six1Q62231 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Six1Q62231 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six1Q62231 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Six1Q62231 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.69■□□□□ 0.26
Six1Q62231 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six1Q62231 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.69■□□□□ 0.26
Six1Q62231 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Six1Q62231 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six1Q62231 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six1Q62231 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.68■□□□□ 0.26
Six1Q62231 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.68■□□□□ 0.26
Six1Q62231 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.68■□□□□ 0.26
Six1Q62231 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six1Q62231 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms