Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.22■□□□□ 0.03
VcanQ62059 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
VcanQ62059 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VcanQ62059 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VcanQ62059 Gm45747-201ENSMUST00000212203 999 ntBASIC15.21■□□□□ 0.03
VcanQ62059 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VcanQ62059 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VcanQ62059 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.21■□□□□ 0.03
VcanQ62059 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VcanQ62059 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.21■□□□□ 0.03
VcanQ62059 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VcanQ62059 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.21■□□□□ 0.03
VcanQ62059 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.21■□□□□ 0.03
VcanQ62059 Gm27301-201ENSMUST00000184012 127 ntBASIC15.21■□□□□ 0.03
VcanQ62059 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VcanQ62059 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.21■□□□□ 0.03
VcanQ62059 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VcanQ62059 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
VcanQ62059 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VcanQ62059 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VcanQ62059 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.21■□□□□ 0.02
VcanQ62059 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VcanQ62059 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.21■□□□□ 0.02
VcanQ62059 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.2■□□□□ 0.02
VcanQ62059 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VcanQ62059 Gm43433-201ENSMUST00000196573 481 ntBASIC15.2■□□□□ 0.02
VcanQ62059 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VcanQ62059 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.2■□□□□ 0.02
VcanQ62059 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.2■□□□□ 0.02
VcanQ62059 Gm17271-201ENSMUST00000165535 355 ntBASIC15.2■□□□□ 0.02
VcanQ62059 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.2■□□□□ 0.02
VcanQ62059 Mir6420-201ENSMUST00000185032 102 ntBASIC15.2■□□□□ 0.02
VcanQ62059 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VcanQ62059 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
VcanQ62059 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.19■□□□□ 0.02
VcanQ62059 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
VcanQ62059 Gm9899-201ENSMUST00000065519 555 ntBASIC15.19■□□□□ 0.02
VcanQ62059 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.19■□□□□ 0.02
VcanQ62059 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Mir7085-201ENSMUST00000184353 66 ntBASIC15.19■□□□□ 0.02
VcanQ62059 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VcanQ62059 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.18■□□□□ 0.02
VcanQ62059 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VcanQ62059 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VcanQ62059 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.18■□□□□ 0.02
VcanQ62059 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.18■□□□□ 0.02
VcanQ62059 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.18■□□□□ 0.02
VcanQ62059 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.18■□□□□ 0.02
VcanQ62059 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.18■□□□□ 0.02
VcanQ62059 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VcanQ62059 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VcanQ62059 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VcanQ62059 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VcanQ62059 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VcanQ62059 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms