Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox17Q61473 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.34■□□□□ 0.05
Sox17Q61473 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Gm43183-201ENSMUST00000200632 547 ntBASIC15.34■□□□□ 0.05
Sox17Q61473 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Sox17Q61473 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox17Q61473 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Sox17Q61473 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox17Q61473 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox17Q61473 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Sox17Q61473 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.33■□□□□ 0.04
Sox17Q61473 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Sox17Q61473 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Sox17Q61473 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.33■□□□□ 0.04
Sox17Q61473 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sox17Q61473 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox17Q61473 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Sox17Q61473 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sox17Q61473 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox17Q61473 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox17Q61473 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox17Q61473 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Sox17Q61473 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox17Q61473 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sox17Q61473 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.31■□□□□ 0.04
Sox17Q61473 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.31■□□□□ 0.04
Sox17Q61473 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox17Q61473 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sox17Q61473 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox17Q61473 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms