Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Zic4Q61467 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Zic4Q61467 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Zic4Q61467 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Zic4Q61467 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Zic4Q61467 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Zic4Q61467 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.23□□□□□ -0.29
Zic4Q61467 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.23□□□□□ -0.29
Zic4Q61467 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Zic4Q61467 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.23□□□□□ -0.29
Zic4Q61467 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Zic4Q61467 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Zic4Q61467 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Zic4Q61467 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Zic4Q61467 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.22□□□□□ -0.29
Zic4Q61467 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.22□□□□□ -0.29
Zic4Q61467 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.22□□□□□ -0.29
Zic4Q61467 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Zic4Q61467 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Zic4Q61467 Actl10-202ENSMUST00000226583 1501 ntBASIC13.22□□□□□ -0.29
Zic4Q61467 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.22□□□□□ -0.29
Zic4Q61467 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.22□□□□□ -0.29
Zic4Q61467 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.22□□□□□ -0.29
Zic4Q61467 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Zic4Q61467 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.22□□□□□ -0.29
Zic4Q61467 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Zic4Q61467 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.21□□□□□ -0.29
Zic4Q61467 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Zic4Q61467 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Zic4Q61467 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Zic4Q61467 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.21□□□□□ -0.29
Zic4Q61467 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.21□□□□□ -0.29
Zic4Q61467 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.21□□□□□ -0.29
Zic4Q61467 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Zic4Q61467 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Zic4Q61467 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Zic4Q61467 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Zic4Q61467 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Zic4Q61467 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Zic4Q61467 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Zic4Q61467 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Zic4Q61467 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Zic4Q61467 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Zic4Q61467 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zic4Q61467 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.2□□□□□ -0.3
Zic4Q61467 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zic4Q61467 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Zic4Q61467 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.2□□□□□ -0.3
Zic4Q61467 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms