Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
Ptch1Q61115 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Ptch1Q61115 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC23.38■■□□□ 1.33
Ptch1Q61115 Gm27622-201ENSMUST00000183779 60 ntBASIC23.38■■□□□ 1.33
Ptch1Q61115 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ptch1Q61115 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Ptch1Q61115 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm5953-201ENSMUST00000220644 2616 ntBASIC23.37■■□□□ 1.33
Ptch1Q61115 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm27301-201ENSMUST00000184012 127 ntBASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm8969-201ENSMUST00000199694 526 ntBASIC23.37■■□□□ 1.33
Ptch1Q61115 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm5628-201ENSMUST00000222318 1049 ntBASIC23.37■■□□□ 1.33
Ptch1Q61115 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Ptch1Q61115 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ptch1Q61115 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC23.37■■□□□ 1.33
Ptch1Q61115 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ptch1Q61115 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptch1Q61115 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC23.36■■□□□ 1.33
Ptch1Q61115 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 Gm22175-201ENSMUST00000175007 78 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Ptch1Q61115 AC126408.1-201ENSMUST00000225184 523 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ptch1Q61115 Gm37519-201ENSMUST00000191687 2210 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 AC119177.1-201ENSMUST00000227647 1332 ntBASIC23.36■■□□□ 1.33
Ptch1Q61115 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
Ptch1Q61115 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.36■■□□□ 1.33
Ptch1Q61115 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Ptch1Q61115 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC23.35■■□□□ 1.33
Ptch1Q61115 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC23.35■■□□□ 1.33
Ptch1Q61115 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ptch1Q61115 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
Ptch1Q61115 AC140397.2-201ENSMUST00000224213 834 ntBASIC23.35■■□□□ 1.33
Ptch1Q61115 Arhgef33-209ENSMUST00000225223 714 ntBASIC23.35■■□□□ 1.33
Ptch1Q61115 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC23.35■■□□□ 1.33
Ptch1Q61115 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC23.35■■□□□ 1.33
Ptch1Q61115 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ptch1Q61115 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ptch1Q61115 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ptch1Q61115 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC23.34■■□□□ 1.33
Ptch1Q61115 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC23.34■■□□□ 1.33
Ptch1Q61115 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC23.34■■□□□ 1.33
Ptch1Q61115 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ptch1Q61115 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptch1Q61115 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ptch1Q61115 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ptch1Q61115 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ptch1Q61115 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC23.33■■□□□ 1.33
Ptch1Q61115 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ptch1Q61115 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ptch1Q61115 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Ptch1Q61115 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Ptch1Q61115 Mir449b-201ENSMUST00000104833 80 ntBASIC23.33■■□□□ 1.32
Ptch1Q61115 Thap2-203ENSMUST00000218989 527 ntBASIC23.33■■□□□ 1.32
Ptch1Q61115 AC151836.1-202ENSMUST00000226259 753 ntBASIC23.33■■□□□ 1.32
Ptch1Q61115 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Ptch1Q61115 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Ptch1Q61115 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ptch1Q61115 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptch1Q61115 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC23.32■■□□□ 1.32
Ptch1Q61115 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC23.32■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms