Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.65■□□□□ 0.26
Slc6a4Q60857 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a4Q60857 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slc6a4Q60857 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Slc6a4Q60857 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.64■□□□□ 0.25
Slc6a4Q60857 Gm25745-201ENSMUST00000174945 133 ntBASIC16.64■□□□□ 0.25
Slc6a4Q60857 Mir8098-201ENSMUST00000184011 137 ntBASIC16.64■□□□□ 0.25
Slc6a4Q60857 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a4Q60857 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.63■□□□□ 0.25
Slc6a4Q60857 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Gm28659-201ENSMUST00000188013 759 ntBASIC16.63■□□□□ 0.25
Slc6a4Q60857 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.63■□□□□ 0.25
Slc6a4Q60857 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.63■□□□□ 0.25
Slc6a4Q60857 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc6a4Q60857 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.62■□□□□ 0.25
Slc6a4Q60857 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.62■□□□□ 0.25
Slc6a4Q60857 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc6a4Q60857 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44357-201ENSMUST00000195897 142 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm19658-201ENSMUST00000196231 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44367-201ENSMUST00000196836 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44350-201ENSMUST00000197197 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44390-201ENSMUST00000197533 144 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44313-201ENSMUST00000198018 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44486-201ENSMUST00000198508 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44314-201ENSMUST00000199263 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44394-201ENSMUST00000199558 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44484-201ENSMUST00000199873 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44466-201ENSMUST00000200264 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm44359-201ENSMUST00000200671 138 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Gm7506-201ENSMUST00000207758 815 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Mzt1-203ENSMUST00000227948 952 ntBASIC16.61■□□□□ 0.25
Slc6a4Q60857 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc6a4Q60857 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms