Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Atp13a4Q5XF90 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Atp13a4Q5XF90 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Atp13a4Q5XF90 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atp13a4Q5XF90 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms