Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm12896-201ENSMUST00000118430 226 ntBASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm26571-201ENSMUST00000181399 666 ntBASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.72□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm9731-201ENSMUST00000209480 747 ntBASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav15-1-dv6-1Q5R1D2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms