Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf20Q5DTM8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf20Q5DTM8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC19.39■□□□□ 0.7
Rnf20Q5DTM8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf20Q5DTM8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf20Q5DTM8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf20Q5DTM8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Gm9013-201ENSMUST00000132939 882 ntBASIC19.37■□□□□ 0.69
Rnf20Q5DTM8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms