Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem40Q4FJU9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Gm27525-201ENSMUST00000184465 107 ntBASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Gm2651-201ENSMUST00000203560 838 ntBASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem40Q4FJU9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Rps4l-201ENSMUST00000071745 943 ntBASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tmem40Q4FJU9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Gm37935-201ENSMUST00000192012 982 ntBASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem40Q4FJU9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms