Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.87■□□□□ 0.29
Trim80Q3V061 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.87■□□□□ 0.29
Trim80Q3V061 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim80Q3V061 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.87■□□□□ 0.29
Trim80Q3V061 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.87■□□□□ 0.29
Trim80Q3V061 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trim80Q3V061 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim80Q3V061 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.86■□□□□ 0.29
Trim80Q3V061 Gm18025-201ENSMUST00000221733 862 ntBASIC16.86■□□□□ 0.29
Trim80Q3V061 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim80Q3V061 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim80Q3V061 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim80Q3V061 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim80Q3V061 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim80Q3V061 Timm23-208ENSMUST00000226683 750 ntBASIC16.85■□□□□ 0.29
Trim80Q3V061 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trim80Q3V061 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Trim80Q3V061 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim80Q3V061 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim80Q3V061 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Trim80Q3V061 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim80Q3V061 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim80Q3V061 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim80Q3V061 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.84■□□□□ 0.29
Trim80Q3V061 Mtag2-201ENSMUST00000058665 714 ntBASIC16.84■□□□□ 0.29
Trim80Q3V061 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim80Q3V061 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim80Q3V061 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim80Q3V061 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim80Q3V061 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim80Q3V061 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim80Q3V061 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trim80Q3V061 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Gm13559-201ENSMUST00000120476 863 ntBASIC16.83■□□□□ 0.28
Trim80Q3V061 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
Trim80Q3V061 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim80Q3V061 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim80Q3V061 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms