Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cks1brtQ3UNC9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cks1brtQ3UNC9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cks1brtQ3UNC9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms