Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Gm5864-201ENSMUST00000202263 970 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Naf1Q3UMQ8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Naf1Q3UMQ8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Naf1Q3UMQ8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Gm36967-201ENSMUST00000193814 266 ntBASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Naf1Q3UMQ8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Mir8098-201ENSMUST00000184011 137 ntBASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Gm28659-201ENSMUST00000188013 759 ntBASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Mzt1-203ENSMUST00000227948 952 ntBASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Naf1Q3UMQ8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Naf1Q3UMQ8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Naf1Q3UMQ8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Naf1Q3UMQ8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Naf1Q3UMQ8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Naf1Q3UMQ8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Naf1Q3UMQ8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms