Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Gm14140-201ENSMUST00000119999 995 ntBASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Upf3aQ3ULJ3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Gm7222-201ENSMUST00000117512 906 ntBASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Upf3aQ3ULJ3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf3aQ3ULJ3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf3aQ3ULJ3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf3aQ3ULJ3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Upf3aQ3ULJ3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upf3aQ3ULJ3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Gm12260-201ENSMUST00000122447 411 ntBASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Mir6404-201ENSMUST00000183699 94 ntBASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upf3aQ3ULJ3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Gm14494-201ENSMUST00000118786 435 ntBASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Gm9727-201ENSMUST00000161387 555 ntBASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Gm27702-201ENSMUST00000184512 56 ntBASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upf3aQ3ULJ3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upf3aQ3ULJ3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms