Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sf3b2Q3UJB0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC21.01■□□□□ 0.95
Sf3b2Q3UJB0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC21.01■□□□□ 0.95
Sf3b2Q3UJB0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Dmtn-210ENSMUST00000228824 2377 ntBASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sf3b2Q3UJB0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sf3b2Q3UJB0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Gm25948-201ENSMUST00000175334 112 ntBASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Gm8825-201ENSMUST00000182565 998 ntBASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sf3b2Q3UJB0 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3b2Q3UJB0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm4518-201ENSMUST00000182638 718 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.96■□□□□ 0.95
Sf3b2Q3UJB0 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms