Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Snx27Q3UHD6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Gm12497-201ENSMUST00000138778 237 ntBASIC17.55■□□□□ 0.4
Snx27Q3UHD6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Snx27Q3UHD6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gm4459-201ENSMUST00000118750 468 ntBASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gm9172-201ENSMUST00000212092 954 ntBASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.54■□□□□ 0.4
Snx27Q3UHD6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Gm18733-201ENSMUST00000173950 856 ntBASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Snx27Q3UHD6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Gm4535-201ENSMUST00000182274 558 ntBASIC17.52■□□□□ 0.4
Snx27Q3UHD6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Gm10355-201ENSMUST00000097146 517 ntBASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Snx27Q3UHD6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.52■□□□□ 0.39
Snx27Q3UHD6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx27Q3UHD6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Snx27Q3UHD6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Snx27Q3UHD6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx27Q3UHD6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx27Q3UHD6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 Gm8097-201ENSMUST00000117903 829 ntBASIC17.51■□□□□ 0.39
Snx27Q3UHD6 Gm13418-201ENSMUST00000119097 944 ntBASIC17.51■□□□□ 0.39
Snx27Q3UHD6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx27Q3UHD6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms