Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col5a2Q3U962 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.23■□□□□ 0.67
Col5a2Q3U962 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Col5a2Q3U962 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Gm45747-201ENSMUST00000212203 999 ntBASIC19.23■□□□□ 0.67
Col5a2Q3U962 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Col5a2Q3U962 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Col5a2Q3U962 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gm5177-201ENSMUST00000183092 997 ntBASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gm44335-201ENSMUST00000196879 141 ntBASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gm44297-201ENSMUST00000198304 141 ntBASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gm44346-201ENSMUST00000198851 141 ntBASIC19.22■□□□□ 0.67
Col5a2Q3U962 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col5a2Q3U962 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.21■□□□□ 0.67
Col5a2Q3U962 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.21■□□□□ 0.67
Col5a2Q3U962 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.21■□□□□ 0.67
Col5a2Q3U962 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col5a2Q3U962 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col5a2Q3U962 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Gm9682-201ENSMUST00000197505 556 ntBASIC19.19■□□□□ 0.66
Col5a2Q3U962 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col5a2Q3U962 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col5a2Q3U962 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col5a2Q3U962 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.18■□□□□ 0.66
Col5a2Q3U962 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col5a2Q3U962 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms