Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Vars2Q3U2A8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vars2Q3U2A8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Gm27430-201ENSMUST00000184585 107 ntBASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Gm44333-201ENSMUST00000197168 107 ntBASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vars2Q3U2A8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.17■□□□□ 0.82
Vars2Q3U2A8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.17■□□□□ 0.82
Vars2Q3U2A8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gm7774-201ENSMUST00000200064 533 ntBASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vars2Q3U2A8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.15■□□□□ 0.82
Vars2Q3U2A8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vars2Q3U2A8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vars2Q3U2A8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vars2Q3U2A8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vars2Q3U2A8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vars2Q3U2A8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Vars2Q3U2A8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.13■□□□□ 0.81
Vars2Q3U2A8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vars2Q3U2A8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms